dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01177
Location and strand information: 25799 - 26680 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01178
Location and strand information: 26811 - 27773 (+)
Family: 3.A.1.1.47
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01179
Location and strand information: 27896 - 29212 (+)
Family: 3.A.1.1.3
Protein type: TC
Protein description: sn-glycerol-3-phosphate-binding periplasmic protein UgpB

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01180
Location and strand information: 29321 - 30040 (+)
Family: null
Protein type: null
Protein description: Phosphoglycolate phosphatase

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01181
Location and strand information: 30049 - 31257 (+)
Family: 3.A.1.1.26
Protein type: TC
Protein description: Trehalose import ATP-binding protein SugC

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01182
Location and strand information: 31254 - 32573 (+)
Family: 2.A.66.1.7
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01183
Location and strand information: 32551 - 32874 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01184
Location and strand information: 33086 - 34501 (+)
Family: 2.A.25.1.4
Protein type: TC
Protein description: Amino-acid carrier protein AlsT

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01185
Location and strand information: 34935 - 35297 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01186
Location and strand information: 35846 - 37972 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01187
Location and strand information: 38177 - 43474 (+)
Family: GH43_4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.5974
Protein molecular weight: 194321.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000250_3|CGC1
Gene ID: MGYG000000250_01188
Location and strand information: 43974 - 45275 (+)
Family: 2.A.103.1.3
Protein type: TC
Protein description: putative peptidoglycan glycosyltransferase FtsW

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000250_01177	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	25799	26680	+	3.A.1.1.36
MGYG000000250_01178	L-arabinose transport system permease protein AraQ	TC	26811	27773	+	3.A.1.1.47
MGYG000000250_01179	sn-glycerol-3-phosphate-binding periplasmic protein UgpB	TC	27896	29212	+	3.A.1.1.3
MGYG000000250_01180	Phosphoglycolate phosphatase	null	29321	30040	+	HAD_2
MGYG000000250_01181	Trehalose import ATP-binding protein SugC	TC	30049	31257	+	3.A.1.1.26
MGYG000000250_01182	Multidrug export protein MepA	TC	31254	32573	+	2.A.66.1.7
MGYG000000250_01183	hypothetical protein	null	32551	32874	+	No domain
MGYG000000250_01184	Amino-acid carrier protein AlsT	TC	33086	34501	+	2.A.25.1.4
MGYG000000250_01185	hypothetical protein	null	34935	35297	+	No domain
MGYG000000250_01186	hypothetical protein	null	35846	37972	+	Cornifin
MGYG000000250_01187	hypothetical protein	CAZyme	38177	43474	+	GH43_4
MGYG000000250_01188	putative peptidoglycan glycosyltransferase FtsW	TC	43974	45275	+	2.A.103.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature